Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108239081 | LOC108240124 | ENSKMAP00000020314 | ENSKMAP00000013609 | Glutamate receptor, metabotropic 1b. | Glutamate receptor, metabotropic 1a. | 0.906 |
LOC108239081 | LOC108248024 | ENSKMAP00000020314 | ENSKMAP00000004579 | Glutamate receptor, metabotropic 1b. | ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. | 0.903 |
LOC108240124 | LOC108239081 | ENSKMAP00000013609 | ENSKMAP00000020314 | Glutamate receptor, metabotropic 1a. | Glutamate receptor, metabotropic 1b. | 0.906 |
LOC108240124 | LOC108248024 | ENSKMAP00000013609 | ENSKMAP00000004579 | Glutamate receptor, metabotropic 1a. | ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. | 0.903 |
LOC108248024 | LOC108239081 | ENSKMAP00000004579 | ENSKMAP00000020314 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. | Glutamate receptor, metabotropic 1b. | 0.903 |
LOC108248024 | LOC108240124 | ENSKMAP00000004579 | ENSKMAP00000013609 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. | Glutamate receptor, metabotropic 1a. | 0.903 |
LOC108248024 | tanc1 | ENSKMAP00000004579 | ENSKMAP00000018353 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. | Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1b. | 0.500 |
LOC108248024 | unc5b | ENSKMAP00000004579 | ENSKMAP00000021079 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. | Unc-5 netrin receptor B. | 0.508 |
tanc1 | LOC108248024 | ENSKMAP00000018353 | ENSKMAP00000004579 | Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1b. | ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. | 0.500 |
unc5b | LOC108248024 | ENSKMAP00000021079 | ENSKMAP00000004579 | Unc-5 netrin receptor B. | ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. | 0.508 |