STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nmiUncharacterized protein. (367 aa)    
Predicted Functional Partners:
ifi35
Interferon-induced protein 35.
  
 
0.899
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.677
LOC108233328
MYCN proto-oncogene, bHLH transcription factor.
    
 
 0.672
brms1
BRMS1 transcriptional repressor and anoikis regulator.
    
   0.574
tnpo3
Transportin 3.
      
 0.566
ifih1
Interferon induced with helicase C domain 1.
   
  
 0.539
LOC108245383
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
   0.492
helz2
Uncharacterized protein.
   
  
 0.448
rpl6
Ribosomal protein L6.
   
 
 0.437
rpl14
Ribosomal protein L14.
   
 
 0.437
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.