STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap36Cilia and flagella associated protein 36. (352 aa)    
Predicted Functional Partners:
arl3
ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.865
LOC108230955
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.865
LOC108240514
ADP ribosylation factor like GTPase 3, like 2; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.809
LOC108231548
Coiled-coil domain containing 114.
      
 0.601
ENSKMAP00000010430
Si:dkey-25g12.4.
   
  
 0.413
dcdc2b
Doublecortin domain-containing protein.
   
  
 0.413
DCDC2
Doublecortin domain containing 2.
   
  
 0.413
ribc1
RIB43A domain with coiled-coils 1.
      
 0.410
ropn1l
Rhophilin associated tail protein 1-like.
      
 0.410
LOC108237444
RIB43A domain with coiled-coils 2.
      
 0.410
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.