STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrp4Low density lipoprotein receptor-related protein 4. (1903 aa)    
Predicted Functional Partners:
agrn
Agrin.
    
 0.877
MUSK
Muscle associated receptor tyrosine kinase.
   
 0.735
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.661
Dab2
PID domain-containing protein.
    
 0.637
LOC108243697
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.632
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
    
 0.600
RELN
Reelin.
    
 0.599
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.599
kremen1
Kringle containing transmembrane protein 1.
   
 0.573
wnt3a
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.565
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.