STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108239395Neurexin 2b. (691 aa)    
Predicted Functional Partners:
LOC108245007
Uncharacterized protein.
 
      0.879
ENSKMAP00000005189
LAM_G_DOMAIN domain-containing protein.
 
      0.874
ENSKMAP00000005230
Uncharacterized protein.
 
      0.799
ENSKMAP00000002760
Uncharacterized protein.
 
      0.795
LOC108249344
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.729
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.729
lrrtm2
Leucine rich repeat transmembrane neuronal 2.
   
 0.614
LOC108247606
Neuroligin 3b.
    
 0.573
LOC108241874
Neuroligin 4 X-linked a.
    
 0.573
nlgn3
Neuroligin 3a.
    
 0.573
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.