scaf4 protein (Kryptolebias marmoratus) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

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Score

scaf4

Uncharacterized protein. (1191 aa)

Predicted Functional Partners:

polr2a

0.839

scaf11

0.687

ncbp2

0.667

rnmt

0.653

exosc10

0.600

NCBP1

0.573

polr2b

0.560

pcf11

0.557

polr2c

0.531

tent4a

0.522

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NCBP1	exosc10	ENSKMAP00000004748	ENSKMAP00000020907	Nuclear cap binding protein subunit 1.	Exosome component 10.	0.574
NCBP1	ncbp2	ENSKMAP00000004748	ENSKMAP00000012915	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	pcf11	ENSKMAP00000004748	ENSKMAP00000002462	Nuclear cap binding protein subunit 1.	PCF11 cleavage and polyadenylation factor subunit.	0.903
NCBP1	polr2a	ENSKMAP00000004748	ENSKMAP00000022045	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.819
NCBP1	polr2b	ENSKMAP00000004748	ENSKMAP00000024169	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.879
NCBP1	polr2c	ENSKMAP00000004748	ENSKMAP00000021802	Nuclear cap binding protein subunit 1.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.866
NCBP1	rnmt	ENSKMAP00000004748	ENSKMAP00000002503	Nuclear cap binding protein subunit 1.	mRNA cap guanine-N7 methyltransferase.	0.882
NCBP1	scaf4	ENSKMAP00000004748	ENSKMAP00000005304	Nuclear cap binding protein subunit 1.	Uncharacterized protein.	0.573
exosc10	NCBP1	ENSKMAP00000020907	ENSKMAP00000004748	Exosome component 10.	Nuclear cap binding protein subunit 1.	0.574
exosc10	pcf11	ENSKMAP00000020907	ENSKMAP00000002462	Exosome component 10.	PCF11 cleavage and polyadenylation factor subunit.	0.430
exosc10	polr2a	ENSKMAP00000020907	ENSKMAP00000022045	Exosome component 10.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.452
exosc10	polr2c	ENSKMAP00000020907	ENSKMAP00000021802	Exosome component 10.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.523
exosc10	scaf4	ENSKMAP00000020907	ENSKMAP00000005304	Exosome component 10.	Uncharacterized protein.	0.600
exosc10	tent4a	ENSKMAP00000020907	ENSKMAP00000000963	Exosome component 10.	Terminal nucleotidyltransferase 4A.	0.694
ncbp2	NCBP1	ENSKMAP00000012915	ENSKMAP00000004748	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Nuclear cap binding protein subunit 1.	0.999
ncbp2	pcf11	ENSKMAP00000012915	ENSKMAP00000002462	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	PCF11 cleavage and polyadenylation factor subunit.	0.876
ncbp2	polr2a	ENSKMAP00000012915	ENSKMAP00000022045	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.842
ncbp2	polr2b	ENSKMAP00000012915	ENSKMAP00000024169	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.865
ncbp2	polr2c	ENSKMAP00000012915	ENSKMAP00000021802	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Polymerase (RNA) II (DNA directed) polypeptide C.	0.926
ncbp2	rnmt	ENSKMAP00000012915	ENSKMAP00000002503	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	mRNA cap guanine-N7 methyltransferase.	0.879