STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emc4ER membrane protein complex subunit 4; Belongs to the EMC4 family. (189 aa)    
Predicted Functional Partners:
emc2
ER membrane protein complex subunit 2.
   
 
 0.995
emc1
ER membrane protein complex subunit 1.
    
 
 0.995
emc6
ER membrane protein complex subunit 6.
   
 
 0.976
emc7
ER membrane protein complex subunit 7.
   
 
 0.971
mmgt1
Membrane magnesium transporter 1.
   
 
 0.963
emc10
ER membrane protein complex subunit 10.
   
 
 0.955
emc8
ER membrane protein complex subunit 8.
   
 
 0.953
emc3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.949
LOC108251436
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.949
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 
 0.943
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.