STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
skap1Src kinase associated phosphoprotein 1. (357 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.642
LOC108234282
Uncharacterized protein.
   
 0.559
Fyb1
Uncharacterized protein.
   
 0.559
ENSKMAP00000013899
hSH3 domain-containing protein.
   
 0.559
rassf5
Ras association domain family member 5.
      
 0.491
aff3
AF4/FMR2 family, member 3.
      
 0.489
aff2
AF4/FMR2 family, member 2.
      
 0.489
stau2
Staufen double-stranded RNA binding protein 2.
      
 0.478
stau1
Staufen double-stranded RNA binding protein 1.
      
 0.478
pccb
Propionyl-CoA carboxylase subunit beta.
      
 0.475
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.