STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108231218LRAT domain-containing protein. (171 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
 0.943
LOC108246908
Lecithin-cholesterol acyltransferase.
   
 
 0.916
lypla2
Lysophospholipase 2.
   
 
 0.911
LOC108238716
Lysophosphatidylcholine acyltransferase 1.
   
 0.911
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
   
 0.911
LOC108232722
Uncharacterized protein.
    
 0.910
mboat1
Membrane bound O-acyltransferase domain containing 1; Belongs to the membrane-bound acyltransferase family.
  
 
 0.910
LOC108241488
Patatin-like phospholipase domain containing 6.
    
 0.910
lpcat2
Lysophosphatidylcholine acyltransferase 2.
   
 0.909
CYP4F8
Cytochrome P450 family 4 subfamily F member 8; Belongs to the cytochrome P450 family.
    
 0.908
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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