STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108250981Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
  
0.745
serpinc1
Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.
   
 0.701
LOC108234991
Si:ch1073-416d2.3; Belongs to the serpin family.
   
 0.582
f5
Coagulation factor V; Belongs to the multicopper oxidase family.
   
 0.575
LOC108246666
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
   
 0.575
ENSKMAP00000023629
Tissue factor pathway inhibitor.
    
 0.567
f3
Coagulation factor IIIa.
    
 0.564
ENSKMAP00000001210
Protein kinase domain-containing protein.
    
  0.551
LOC108231402
Macrophage stimulating 1 receptor a.
    
  0.551
ENSKMAP00000014853
Sema domain-containing protein.
    
  0.551
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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