STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frem2FRAS1 related extracellular matrix 2a. (3146 aa)    
Predicted Functional Partners:
LOC108245194
Integrin beta; Belongs to the integrin beta chain family.
    
 0.910
LOC108243855
Integrin beta; Belongs to the integrin beta chain family.
    
 0.910
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
     
  0.904
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.769
ENSKMAP00000005610
Uncharacterized protein.
 
 
 0.750
ENSKMAP00000016125
SRCR domain-containing protein.
    
 0.603
nrp2
Neuropilin; Belongs to the neuropilin family.
    
 0.587
LOC108240408
RAN binding protein 2.
   
 
  0.493
gle1
GLE1 RNA export mediator.
    
 0.472
FBLN1
Fibulin 1.
    
 0.458
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.