STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ephx2Epoxide hydrolase 2, cytoplasmic. (561 aa)    
Predicted Functional Partners:
LOC108228793
Peroxisomal biogenesis factor 5-like b.
   
 0.944
pex5
Peroxisomal biogenesis factor 5.
   
 0.944
pex5l
Peroxisomal biogenesis factor 5-like a.
   
 0.944
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
  0.937
pex13
Peroxisomal biogenesis factor 13.
    
 0.935
fam185a
Family with sequence similarity 185 member A.
   
 
  0.933
pex14
Peroxisomal biogenesis factor 14.
   
 
  0.933
rps27a
Ribosomal protein S27a.
   
 
  0.931
pex2
Peroxisomal biogenesis factor 2.
   
 
  0.931
LOC108230778
Cytochrome p450 CYP2Z6; Belongs to the cytochrome P450 family.
  
 0.920
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.