STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap99Cilia and flagella associated protein 99. (610 aa)    
Predicted Functional Partners:
ccdc65
NYD-SP28 domain-containing protein.
   
   0.634
ankef1
Ankyrin repeat and EF-hand domain containing 1a.
   
  0.630
LOC108251537
Radial spoke head component 4A.
   
 
 0.599
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.560
ube2g1
Ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.544
pank4
Pantothenate kinase.
    
 
 0.537
mapk4
Mitogen-activated protein kinase 4.
    
 0.512
rsph10b
Radial spoke head 10 homolog B.
    
 
 0.511
psma6
Proteasome subunit alpha type.
    
 0.473
ENSKMAP00000024068
Ig-like domain-containing protein.
   
 0.472
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.