STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capn10Calpain 10; Belongs to the peptidase C2 family. (674 aa)    
Predicted Functional Partners:
ENSKMAP00000025651
Uncharacterized protein.
    
 0.713
CAPNS1
Calpain small subunit 1.
 
 
 0.673
LOC108243122
Calpain, small subunit 1 b.
 
 
 0.672
rab27a
RAB27A, member RAS oncogene family.
      
 0.570
hgd
Homogentisate 1,2-dioxygenase.
      
 0.570
agt
Angiotensinogen; Belongs to the serpin family.
     
 0.568
Itsn2
Uncharacterized protein.
   
 
  0.485
ENSKMAP00000015043
SH3 domain-containing protein.
   
 
  0.485
ENSKMAP00000015068
EF-hand domain-containing protein.
   
 
  0.485
ENSKMAP00000015114
Uncharacterized protein.
   
 
  0.485
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (16%) [HD]