STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem161aTransmembrane protein 161A. (497 aa)    
Predicted Functional Partners:
klhl31
Kelch-like family member 31.
      
 0.659
tmem38a
Transmembrane protein 38A.
      
 0.633
tmem94
Transmembrane protein 94.
      
 0.571
nfatc4
Nuclear factor of activated T cells 4.
      
 0.491
pold1
DNA polymerase.
      
 0.489
tmem214
Transmembrane protein 214.
      
 0.489
rhbdd1
Rhomboid domain containing 1.
      
 0.487
LOC108246418
Si:ch211-119c20.2.
      
 0.485
LOC108246065
Cell division cycle 25B.
      
 0.449
popdc2
Popeye domain containing 2.
      
 0.424
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.