Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108229660 | fam92a | ENSKMAP00000010392 | ENSKMAP00000007003 | DPH-type MB domain-containing protein. | Family with sequence similarity 92 member A1. | 0.427 |
LOC108230101 | fam92a | ENSKMAP00000020807 | ENSKMAP00000007003 | Tetratricopeptide repeat domain 23. | Family with sequence similarity 92 member A1. | 0.471 |
LOC108234478 | LOC108240957 | ENSKMAP00000026325 | ENSKMAP00000027661 | Uncharacterized protein. | RAB guanine nucleotide exchange factor (GEF) 1, like. | 0.589 |
LOC108234478 | fam92a | ENSKMAP00000026325 | ENSKMAP00000007003 | Uncharacterized protein. | Family with sequence similarity 92 member A1. | 0.427 |
LOC108234478 | rabgef1 | ENSKMAP00000026325 | ENSKMAP00000025555 | Uncharacterized protein. | RAB guanine nucleotide exchange factor (GEF) 1. | 0.585 |
LOC108234478 | zfand4 | ENSKMAP00000026325 | ENSKMAP00000006476 | Uncharacterized protein. | Zinc finger, AN1-type domain 4. | 0.890 |
LOC108240408 | LOC108248174 | ENSKMAP00000001474 | ENSKMAP00000013593 | RAN binding protein 2. | Adhesion G protein-coupled receptor B1a; Belongs to the G-protein coupled receptor 2 family. | 0.973 |
LOC108240408 | ND4 | ENSKMAP00000001474 | ENSKMAP00000000011 | RAN binding protein 2. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.409 |
LOC108240408 | fam92a | ENSKMAP00000001474 | ENSKMAP00000007003 | RAN binding protein 2. | Family with sequence similarity 92 member A1. | 0.534 |
LOC108240957 | LOC108234478 | ENSKMAP00000027661 | ENSKMAP00000026325 | RAB guanine nucleotide exchange factor (GEF) 1, like. | Uncharacterized protein. | 0.589 |
LOC108240957 | fam92a | ENSKMAP00000027661 | ENSKMAP00000007003 | RAB guanine nucleotide exchange factor (GEF) 1, like. | Family with sequence similarity 92 member A1. | 0.427 |
LOC108240957 | rabgef1 | ENSKMAP00000027661 | ENSKMAP00000025555 | RAB guanine nucleotide exchange factor (GEF) 1, like. | RAB guanine nucleotide exchange factor (GEF) 1. | 0.573 |
LOC108240957 | zfand4 | ENSKMAP00000027661 | ENSKMAP00000006476 | RAB guanine nucleotide exchange factor (GEF) 1, like. | Zinc finger, AN1-type domain 4. | 0.890 |
LOC108245693 | fam92a | ENSKMAP00000006376 | ENSKMAP00000007003 | DAZ interacting zinc finger protein 1. | Family with sequence similarity 92 member A1. | 0.610 |
LOC108248174 | LOC108240408 | ENSKMAP00000013593 | ENSKMAP00000001474 | Adhesion G protein-coupled receptor B1a; Belongs to the G-protein coupled receptor 2 family. | RAN binding protein 2. | 0.973 |
LOC108248174 | fam92a | ENSKMAP00000013593 | ENSKMAP00000007003 | Adhesion G protein-coupled receptor B1a; Belongs to the G-protein coupled receptor 2 family. | Family with sequence similarity 92 member A1. | 0.425 |
ND4 | LOC108240408 | ENSKMAP00000000011 | ENSKMAP00000001474 | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | RAN binding protein 2. | 0.409 |
ND4 | fam92a | ENSKMAP00000000011 | ENSKMAP00000007003 | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Family with sequence similarity 92 member A1. | 0.519 |
fam92a | LOC108229660 | ENSKMAP00000007003 | ENSKMAP00000010392 | Family with sequence similarity 92 member A1. | DPH-type MB domain-containing protein. | 0.427 |
fam92a | LOC108230101 | ENSKMAP00000007003 | ENSKMAP00000020807 | Family with sequence similarity 92 member A1. | Tetratricopeptide repeat domain 23. | 0.471 |
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