STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108235508Si:dkeyp-69b9.6. (1566 aa)    
Predicted Functional Partners:
ENSKMAP00000005764
Coiled-coil domain containing 88B.
  
     0.478
LOC108245229
Activating transcription factor 5a.
  
 
   0.474
LOC108245937
Embryonal Fyn-associated substrate.
  
 
  0.454
LOC108245957
Si:ch211-261d7.3.
  
     0.451
LOC108243383
Neural retina leucine zipper.
  
 
  0.443
LOC108241555
Pygopus homolog 2 (Drosophila).
  
 
  0.437
LOC108238673
Homeobox and leucine zipper encoding a.
  
 
  0.437
LOC108228486
SH2B adaptor protein 1.
  
     0.429
ajuba
Ajuba LIM protein.
  
 
   0.407
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.