STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000007265Murine retrovirus integration site 1 homolog. (373 aa)    
Predicted Functional Partners:
efhb
EF-hand domain family, member B.
      
 0.554
cd44
CD44 molecule (Indian blood group) b.
     
 0.536
Itpr3
Uncharacterized protein.
    
 0.525
itpr2
Inositol 1,4,5-trisphosphate receptor, type 2.
    
 0.525
LOC108235741
Inositol 1,4,5-trisphosphate receptor, type 1a.
    
 0.525
itpr1
Inositol 1,4,5-trisphosphate receptor, type 1b.
    
 0.525
chp1
Calcineurin-like EF-hand protein 1.
    
  0.502
prkg2
cGMP-dependent protein kinase.
   
 0.466
LOC108230933
cGMP-dependent protein kinase.
   
 0.466
LOC108240136
Si:dkey-121j17.5.
   
 0.466
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.