STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108233673EGF-like domain-containing protein. (168 aa)    
Predicted Functional Partners:
LOC108231089
Betacellulin, epidermal growth factor family member.
     
 0.825
tgfa
Transforming growth factor, alpha.
     
 0.763
LOC108242040
Heparin-binding EGF-like growth factor a.
     
 0.762
LOC108233675
Uncharacterized protein.
     
 0.749
egf
Epidermal growth factor.
    
 0.738
LOC108248942
Receptor protein-tyrosine kinase.
    
 0.670
spry1
Sprouty homolog 1, antagonist of FGF signaling (Drosophila).
     
 0.592
egfr
Receptor protein-tyrosine kinase.
    
 0.557
erbb4
Receptor protein-tyrosine kinase.
    
 0.557
ENSKMAP00000005163
Uncharacterized protein.
    
 0.557
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.