STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbrg4Transforming growth factor beta regulator 4. (629 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 
 0.936
Ap4e1
Adaptor related protein complex 4 subunit epsilon 1.
    
 0.752
ap4b1
Adaptor related protein complex 4 subunit beta 1.
    
 0.749
ap1g1
AP-1 complex subunit gamma.
    
 0.731
LOC108238648
AP-1 complex subunit gamma.
    
 0.731
ap1b1
AP complex subunit beta.
    
 0.718
LOC108238077
AP complex subunit beta.
    
 0.718
ENSKMAP00000012365
Adaptor related protein complex 4 subunit mu 1.
    
 0.658
LOC108238464
Adaptor related protein complex 1 subunit mu 3; Belongs to the adaptor complexes medium subunit family.
    
 0.658
ap1m2
AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.658
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.