STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mybl2V-myb avian myeloblastosis viral oncogene homolog-like 2b. (634 aa)    
Predicted Functional Partners:
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.992
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.987
lin37
Lin-37 DREAM MuvB core complex component.
   
 0.980
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.975
LOC108232401
Retinoblastoma binding protein 4.
   
 0.961
ccna2
Cyclin A2; Belongs to the cyclin family.
   
 0.947
cdk2
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.929
foxm1
Forkhead box M1.
   
 0.807
espl1
Extra spindle pole bodies like 1, separase.
   
  
 0.721
e2f1
E2F transcription factor 1.
   
 0.683
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.