STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c6Complement component 6. (884 aa)    
Predicted Functional Partners:
c7
Complement component 7a.
  
0.980
c9
Complement component 9.
   
0.979
c5
NTR domain-containing protein.
   
 0.975
c8g
Complement component 8, gamma polypeptide; Belongs to the calycin superfamily. Lipocalin family.
   
 0.887
C8A
Complement C8 alpha chain.
   
 
0.878
c8b
Complement component 8, beta polypeptide.
   
 
0.747
LOC108238902
Vitronectin b.
   
 
 0.561
LOC108246043
Vitronectin a.
   
 
 0.561
LOC108250911
Complement component 7b.
   
 
 
0.551
LOC108233711
Voltage-dependent anion channel 3.
     
  0.540
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.