STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcxrDicarbonyl/L-xylulose reductase. (267 aa)    
Predicted Functional Partners:
sord
Sorbitol dehydrogenase.
   
 
 0.919
akr1b1
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2.
   
 
 0.909
tmem231
Transmembrane protein 231.
      
 0.541
slc35e3
Solute carrier family 35 member E3.
      
 0.489
miga2
Mitoguardin 2.
      
 0.489
rnf217
RBR-type E3 ubiquitin transferase.
      
 0.489
foxred1
FAD-dependent oxidoreductase domain containing 1.
      
 0.480
dnajc24
Uncharacterized protein.
    
 
 0.479
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
      
 0.414
LOC108241853
Ankyrin repeat domain 10a.
    
 
 0.408
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.