trub1 protein (Kryptolebias marmoratus) - STRING interaction network

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Score

trub1

TruB pseudouridine (psi) synthase family member 1. (278 aa)

Predicted Functional Partners:

gar1

0.985

nop56

0.982

nop10

0.977

nop58

0.975

shq1

0.970

fbl

0.969

wrap53

0.936

Rpp38

0.909

snu13

0.909

naf1

0.899

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Rpp38	fbl	ENSKMAP00000005263	ENSKMAP00000004880	Ribonuclease P/MRP 38 subunit.	Fibrillarin.	0.986
Rpp38	gar1	ENSKMAP00000005263	ENSKMAP00000013865	Ribonuclease P/MRP 38 subunit.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.926
Rpp38	naf1	ENSKMAP00000005263	ENSKMAP00000007188	Ribonuclease P/MRP 38 subunit.	Uncharacterized protein.	0.768
Rpp38	nop10	ENSKMAP00000005263	ENSKMAP00000005633	Ribonuclease P/MRP 38 subunit.	NOP10 ribonucleoprotein homolog (yeast).	0.970
Rpp38	nop56	ENSKMAP00000005263	ENSKMAP00000026215	Ribonuclease P/MRP 38 subunit.	NOP56 ribonucleoprotein homolog.	0.996
Rpp38	nop58	ENSKMAP00000005263	ENSKMAP00000001039	Ribonuclease P/MRP 38 subunit.	NOP58 ribonucleoprotein homolog (yeast).	0.993
Rpp38	shq1	ENSKMAP00000005263	ENSKMAP00000005866	Ribonuclease P/MRP 38 subunit.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.448
Rpp38	trub1	ENSKMAP00000005263	ENSKMAP00000008280	Ribonuclease P/MRP 38 subunit.	TruB pseudouridine (psi) synthase family member 1.	0.909
Rpp38	wrap53	ENSKMAP00000005263	ENSKMAP00000007181	Ribonuclease P/MRP 38 subunit.	WD repeat containing, antisense to TP53.	0.702
fbl	Rpp38	ENSKMAP00000004880	ENSKMAP00000005263	Fibrillarin.	Ribonuclease P/MRP 38 subunit.	0.986
fbl	gar1	ENSKMAP00000004880	ENSKMAP00000013865	Fibrillarin.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.985
fbl	naf1	ENSKMAP00000004880	ENSKMAP00000007188	Fibrillarin.	Uncharacterized protein.	0.490
fbl	nop10	ENSKMAP00000004880	ENSKMAP00000005633	Fibrillarin.	NOP10 ribonucleoprotein homolog (yeast).	0.803
fbl	nop56	ENSKMAP00000004880	ENSKMAP00000026215	Fibrillarin.	NOP56 ribonucleoprotein homolog.	0.999
fbl	nop58	ENSKMAP00000004880	ENSKMAP00000001039	Fibrillarin.	NOP58 ribonucleoprotein homolog (yeast).	0.999
fbl	snu13	ENSKMAP00000004880	ENSKMAP00000011751	Fibrillarin.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.999
fbl	trub1	ENSKMAP00000004880	ENSKMAP00000008280	Fibrillarin.	TruB pseudouridine (psi) synthase family member 1.	0.969
gar1	Rpp38	ENSKMAP00000013865	ENSKMAP00000005263	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Ribonuclease P/MRP 38 subunit.	0.926
gar1	fbl	ENSKMAP00000013865	ENSKMAP00000004880	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Fibrillarin.	0.985
gar1	naf1	ENSKMAP00000013865	ENSKMAP00000007188	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.805