STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNNM1Cyclin and CBS domain divalent metal cation transport mediator 1. (900 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 
 0.679
nt5e
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
    
 0.565
trps1
Trichorhinophalangeal syndrome I.
      
 0.529
psat1
Phosphoserine aminotransferase.
     
 0.499
lrp1b
Low density lipoprotein receptor-related protein 1Bb.
   
  
 0.494
ybey
YbeY metalloendoribonuclease.
  
  
 0.488
ENSKMAP00000004758
MGS domain-containing protein.
    
 0.481
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.481
rgn
Regucalcin.
   
  
 0.449
ptp4a1
Protein tyrosine phosphatase 4A1.
    
 
 0.430
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.