STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sntg2Syntrophin, gamma 2. (511 aa)    
Predicted Functional Partners:
pick1
Protein interacting with prkca 1.
      
 0.662
exoc4
Exocyst complex component 4.
      
 0.662
erbin
Erbb2 interacting protein.
      
 0.661
LOC108241794
Si:dkey-33c9.6.
      
 0.660
ephb3
Uncharacterized protein.
      
 0.635
dtna
Dystrobrevin.
    
 
 0.510
dtnb
Dystrobrevin.
    
 
 0.510
pbk
PDZ binding kinase.
      
 0.507
LOC108245677
Eph receptor A7.
      
 0.491
atp11c
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.489
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.