STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL2ELAV-like protein; Belongs to the RRM elav family. (389 aa)    
Predicted Functional Partners:
ddx6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
    
 0.632
ENSKMAP00000016812
RRM domain-containing protein.
  
 0.623
tra2b
Transformer 2 beta homolog.
  
 0.619
ENSKMAP00000016612
RNA binding motif protein 38.
  
 
 
 0.583
LOC108241183
RRM domain-containing protein.
  
 
 
 0.582
LOC108242029
RNA binding motif protein 24b.
  
 
 
 0.582
igf2bp3
Insulin-like growth factor 2 mRNA binding protein 3.
    
 
 0.567
LOC108237959
RNA binding motif protein 24a.
  
 
 
 0.564
LOC108230491
DLC1 Rho GTPase activating protein.
      
 0.563
LOC108235511
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
  
 
 0.555
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.