STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108234788Enah/Vasp-like. (372 aa)    
Predicted Functional Partners:
nf1
Neurofibromin 1b.
    
 0.652
Nek2
NIMA-related kinase 2.
    
 0.652
zyx
Zyxin.
   
 0.632
fblim1
Filamin binding LIM protein 1.
    
 0.626
tes
Testis derived transcript (3 LIM domains).
   
 0.619
LOC108240214
LIM domain containing preferred translocation partner in lipoma.
    
 0.580
LOC108249528
Uncharacterized protein.
    
 0.580
LOC108238345
Profilin; Belongs to the profilin family.
   
 0.524
LOC108229628
Profilin; Belongs to the profilin family.
   
 0.524
LOC108234356
Profilin; Belongs to the profilin family.
   
 0.524
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.