STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108250465Ig-like domain-containing protein. (239 aa)    
Predicted Functional Partners:
cd74
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.977
rps14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.787
LOC108250800
Uncharacterized protein.
   
  0.718
ENSKMAP00000024678
Protein kinase domain-containing protein.
   
  0.718
ENSKMAP00000025264
Protein kinase domain-containing protein.
   
  0.718
ENSKMAP00000009250
MHC_II_beta domain-containing protein.
  
 0.713
mrps11
Mitochondrial ribosomal protein S11.
   
 0.696
LOC108249064
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 
 
0.590
LOC108251727
Ig-like domain-containing protein.
  
  
 
0.550
LOC108245406
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
     
  0.540
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (16%) [HD]