STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108238667Zgc:136472. (517 aa)    
Predicted Functional Partners:
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.895
LOC108230540
Calreticulin.
   
 0.853
ero1b
Endoplasmic reticulum oxidoreductase beta.
   
 0.768
ero1a
Endoplasmic reticulum oxidoreductase alpha.
   
 0.768
mttp
Microsomal triglyceride transfer protein.
   
 0.686
dld
Dihydrolipoyl dehydrogenase.
  
 0.684
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.680
clgn
Calmegin.
   
 0.674
LOC108251406
Calnexin.
   
 0.674
LOC108242677
TAP binding protein (tapasin), tandem duplicate 2.
    
 0.644
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.