STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cunh3orf14Uncharacterized protein. (136 aa)    
Predicted Functional Partners:
LOC108251021
Uncharacterized protein.
      
 0.630
carnmt1
Carnosine N-methyltransferase 1.
      
 0.602
ccdc77
Coiled-coil domain containing 77.
      
 0.599
DONSON
Downstream neighbor of SON.
      
 0.571
znf367
Zinc finger protein 367.
      
 0.569
mgme1
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family.
      
 0.568
ttc1
Tetratricopeptide repeat domain 1.
      
 0.491
thap11
THAP domain containing 11.
      
 0.408
NT5M
5',3'-nucleotidase, mitochondrial.
      
 0.405
ribc1
RIB43A domain with coiled-coils 1.
      
 0.404
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (18%) [HD]