STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108246889Calbindin 2a. (271 aa)    
Predicted Functional Partners:
LOC108249344
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.675
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.675
dcx
Uncharacterized protein.
     
 0.593
rgs7
Regulator of G protein signaling 7a.
   
  
 0.570
Wdr90
WD_REPEATS_REGION domain-containing protein.
   
 0.539
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.496
zpr1
ZPR1 zinc finger.
      
 0.487
LOC108236239
Parvalbumin 6; Belongs to the parvalbumin family.
      
 0.480
LOC108236984
Doublecortin-like kinase 1a.
   
 0.477
LOC108235970
Doublecortin-like kinase 1b.
   
 0.477
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.