Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSKMAP00000002577 | FYN | ENSKMAP00000002577 | ENSKMAP00000021377 | SH2 domain-containing protein. | Tyrosine-protein kinase. | 0.460 |
ENSKMAP00000002577 | LOC108235753 | ENSKMAP00000002577 | ENSKMAP00000025734 | SH2 domain-containing protein. | Signal transducer and activator of transcription. | 0.692 |
ENSKMAP00000002577 | LOC108239426 | ENSKMAP00000002577 | ENSKMAP00000009478 | SH2 domain-containing protein. | Signal transducing adaptor family member 2a. | 0.404 |
ENSKMAP00000002577 | LOC108241717 | ENSKMAP00000002577 | ENSKMAP00000004332 | SH2 domain-containing protein. | Tyrosine-protein kinase. | 0.460 |
ENSKMAP00000002577 | LOC108241808 | ENSKMAP00000002577 | ENSKMAP00000012716 | SH2 domain-containing protein. | Tyrosine-protein kinase. | 0.460 |
ENSKMAP00000002577 | stat3 | ENSKMAP00000002577 | ENSKMAP00000026789 | SH2 domain-containing protein. | Signal transducer and activator of transcription. | 0.543 |
FYN | ENSKMAP00000002577 | ENSKMAP00000021377 | ENSKMAP00000002577 | Tyrosine-protein kinase. | SH2 domain-containing protein. | 0.460 |
FYN | LOC108235753 | ENSKMAP00000021377 | ENSKMAP00000025734 | Tyrosine-protein kinase. | Signal transducer and activator of transcription. | 0.460 |
FYN | LOC108239426 | ENSKMAP00000021377 | ENSKMAP00000009478 | Tyrosine-protein kinase. | Signal transducing adaptor family member 2a. | 0.579 |
FYN | stat3 | ENSKMAP00000021377 | ENSKMAP00000026789 | Tyrosine-protein kinase. | Signal transducer and activator of transcription. | 0.460 |
FYN | stat4 | ENSKMAP00000021377 | ENSKMAP00000021579 | Tyrosine-protein kinase. | Signal transducer and activator of transcription. | 0.460 |
LOC108235753 | ENSKMAP00000002577 | ENSKMAP00000025734 | ENSKMAP00000002577 | Signal transducer and activator of transcription. | SH2 domain-containing protein. | 0.692 |
LOC108235753 | FYN | ENSKMAP00000025734 | ENSKMAP00000021377 | Signal transducer and activator of transcription. | Tyrosine-protein kinase. | 0.460 |
LOC108235753 | LOC108239426 | ENSKMAP00000025734 | ENSKMAP00000009478 | Signal transducer and activator of transcription. | Signal transducing adaptor family member 2a. | 0.404 |
LOC108235753 | LOC108241717 | ENSKMAP00000025734 | ENSKMAP00000004332 | Signal transducer and activator of transcription. | Tyrosine-protein kinase. | 0.460 |
LOC108235753 | LOC108241808 | ENSKMAP00000025734 | ENSKMAP00000012716 | Signal transducer and activator of transcription. | Tyrosine-protein kinase. | 0.460 |
LOC108239426 | ENSKMAP00000002577 | ENSKMAP00000009478 | ENSKMAP00000002577 | Signal transducing adaptor family member 2a. | SH2 domain-containing protein. | 0.404 |
LOC108239426 | FYN | ENSKMAP00000009478 | ENSKMAP00000021377 | Signal transducing adaptor family member 2a. | Tyrosine-protein kinase. | 0.579 |
LOC108239426 | LOC108235753 | ENSKMAP00000009478 | ENSKMAP00000025734 | Signal transducing adaptor family member 2a. | Signal transducer and activator of transcription. | 0.404 |
LOC108239426 | LOC108241717 | ENSKMAP00000009478 | ENSKMAP00000004332 | Signal transducing adaptor family member 2a. | Tyrosine-protein kinase. | 0.579 |
page 1 of 3