STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eya1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (611 aa)    
Predicted Functional Partners:
six1
SIX homeobox 1a.
   
 
 0.807
six2
SIX homeobox 2a.
   
 
 0.734
six4
SIX homeobox 4a.
   
 
 0.731
LOC108238549
Fibronectin 1a.
      
 0.636
shisa2
Shisa family member 2b.
      
 0.629
LOC108240926
SIX homeobox 9.
   
 
 0.583
LOC108240921
SIX homeobox 5.
   
 
 0.583
hoxc11
Homeobox C11a.
    
 
 0.497
LOC108249081
SIX homeobox 7.
   
 
 0.495
six3
SIX homeobox 3a.
   
 
 0.495
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.