STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000010077Uncharacterized protein. (430 aa)    
Predicted Functional Partners:
MAX
MYC associated factor X.
    
 0.869
max
Myc associated factor X.
    
 0.869
ENSKMAP00000001971
THAP-type domain-containing protein.
    
 0.798
LOC108249239
FCS-type domain-containing protein.
   
 0.713
mbtd1
Mbt domain containing 1.
   
 0.713
rnf2
Ring finger protein 2.
    
 0.680
pcgf1
Polycomb group ring finger 1.
    
 0.637
pcgf6
Polycomb group ring finger 6.
    
 0.637
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
   0.604
rybp
RING1 and YY1 binding protein b.
    
 0.598
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.