STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl51Mitochondrial ribosomal protein L51. (131 aa)    
Predicted Functional Partners:
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.971
mrpl15
Mitochondrial ribosomal protein L15.
   
   0.957
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.954
mrpl48
Mitochondrial ribosomal protein L48.
   
 
 0.951
Mrpl55
Zgc:171480.
   
 
 0.948
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.947
mrps18c
Mitochondrial ribosomal protein S18C.
   
 
 0.946
mrps14
Mitochondrial ribosomal protein S14.
   
 
 0.942
mrpl35
Mitochondrial ribosomal protein L35.
   
 
 0.935
mrpl40
Mitochondrial ribosomal protein L40.
   
 
 0.927
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.