STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108235453Uncharacterized protein. (197 aa)    
Predicted Functional Partners:
was
Uncharacterized protein.
   
 0.970
LOC108235051
WASP like actin nucleation promoting factor b.
   
 0.970
iqgap2
IQ motif containing GTPase activating protein 2.
   
 0.962
iqgap1
IQ motif containing GTPase activating protein 1.
   
 0.962
LOC108250194
IQ motif containing GTPase activating protein 3.
   
 0.962
LOC108250860
Uncharacterized protein.
    
 0.956
LOC108237796
Par-6 family cell polarity regulator gamma b.
    
 0.956
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.956
diaph3
Diaphanous-related formin 3.
   
 0.951
LOC108229598
FYVE, RhoGEF and PH domain containing 1.
   
 0.934
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.