Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC108229608 | nr6a1 | ENSKMAP00000009314 | ENSKMAP00000010749 | Proteasome subunit beta. | Nuclear receptor subfamily 6, group A, member 1a. | 0.403 |
| LOC108239440 | nr6a1 | ENSKMAP00000006487 | ENSKMAP00000010749 | Mitochondrial E3 ubiquitin protein ligase 1a. | Nuclear receptor subfamily 6, group A, member 1a. | 0.518 |
| SYDE1 | nr6a1 | ENSKMAP00000002463 | ENSKMAP00000010749 | Synapse defective Rho GTPase homolog 1. | Nuclear receptor subfamily 6, group A, member 1a. | 0.482 |
| alkbh7 | nr6a1 | ENSKMAP00000001422 | ENSKMAP00000010749 | AlkB homolog 7. | Nuclear receptor subfamily 6, group A, member 1a. | 0.408 |
| csrnp2 | nr6a1 | ENSKMAP00000007127 | ENSKMAP00000010749 | Cysteine-serine-rich nuclear protein 2. | Nuclear receptor subfamily 6, group A, member 1a. | 0.404 |
| mc1r | nr6a1 | ENSKMAP00000013114 | ENSKMAP00000010749 | Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. | Nuclear receptor subfamily 6, group A, member 1a. | 0.406 |
| med1 | ncor1 | ENSKMAP00000023121 | ENSKMAP00000016456 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 1. | 0.657 |
| med1 | ncor2 | ENSKMAP00000023121 | ENSKMAP00000026676 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 2. | 0.657 |
| med1 | nr6a1 | ENSKMAP00000023121 | ENSKMAP00000010749 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor subfamily 6, group A, member 1a. | 0.646 |
| mul1 | nr6a1 | ENSKMAP00000005015 | ENSKMAP00000010749 | Mitochondrial E3 ubiquitin protein ligase 1b. | Nuclear receptor subfamily 6, group A, member 1a. | 0.518 |
| ncor1 | med1 | ENSKMAP00000016456 | ENSKMAP00000023121 | Nuclear receptor corepressor 1. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.657 |
| ncor1 | nr6a1 | ENSKMAP00000016456 | ENSKMAP00000010749 | Nuclear receptor corepressor 1. | Nuclear receptor subfamily 6, group A, member 1a. | 0.715 |
| ncor2 | med1 | ENSKMAP00000026676 | ENSKMAP00000023121 | Nuclear receptor corepressor 2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.657 |
| ncor2 | nr6a1 | ENSKMAP00000026676 | ENSKMAP00000010749 | Nuclear receptor corepressor 2. | Nuclear receptor subfamily 6, group A, member 1a. | 0.715 |
| nr6a1 | LOC108229608 | ENSKMAP00000010749 | ENSKMAP00000009314 | Nuclear receptor subfamily 6, group A, member 1a. | Proteasome subunit beta. | 0.403 |
| nr6a1 | LOC108239440 | ENSKMAP00000010749 | ENSKMAP00000006487 | Nuclear receptor subfamily 6, group A, member 1a. | Mitochondrial E3 ubiquitin protein ligase 1a. | 0.518 |
| nr6a1 | SYDE1 | ENSKMAP00000010749 | ENSKMAP00000002463 | Nuclear receptor subfamily 6, group A, member 1a. | Synapse defective Rho GTPase homolog 1. | 0.482 |
| nr6a1 | alkbh7 | ENSKMAP00000010749 | ENSKMAP00000001422 | Nuclear receptor subfamily 6, group A, member 1a. | AlkB homolog 7. | 0.408 |
| nr6a1 | csrnp2 | ENSKMAP00000010749 | ENSKMAP00000007127 | Nuclear receptor subfamily 6, group A, member 1a. | Cysteine-serine-rich nuclear protein 2. | 0.404 |
| nr6a1 | mc1r | ENSKMAP00000010749 | ENSKMAP00000013114 | Nuclear receptor subfamily 6, group A, member 1a. | Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family. | 0.406 |
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