STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108229693VEFS-Box domain-containing protein. (613 aa)    
Predicted Functional Partners:
eed
Embryonic ectoderm development.
   
 0.970
jarid2
Jumonji, AT rich interactive domain 2b.
    
 0.956
ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.932
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.932
LOC108237907
Retinoblastoma binding protein 4, like.
    
 0.929
LOC108232401
Retinoblastoma binding protein 4.
    
 0.929
AEBP2
AE binding protein 2.
    
 0.901
LOC108249072
AE binding protein 2.
    
 0.901
setd7
SET domain containing 7, histone lysine methyltransferase.
   
 0.866
ENSKMAP00000022147
WD repeat domain 73.
    
 0.865
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.