STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108228936Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (390 aa)    
Predicted Functional Partners:
LOC108248102
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
  
 
 0.914
LOC108241380
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
  
 
 0.914
dhcr24
24-dehydrocholesterol reductase.
     
 0.909
dhcr7
7-dehydrocholesterol reductase.
    
 0.909
LOC108250404
Cytochrome P450, family 7, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
 0.871
LOC108244749
Cholesterol 25-hydroxylase like 2; Belongs to the sterol desaturase family.
   
 
 0.834
ch25h
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 
 0.834
LOC108229945
Cholesterol 25-hydroxylase like 1, tandem duplicate 1; Belongs to the sterol desaturase family.
   
 
 0.834
ENSKMAP00000022691
Cholesterol 25-hydroxylase like 1, tandem duplicate 2; Belongs to the sterol desaturase family.
   
 
 0.834
LOC108234932
Cholesterol 25-hydroxylase like 3; Belongs to the sterol desaturase family.
   
 
 0.832
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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