STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000011643Olfactory marker protein b. (161 aa)    
Predicted Functional Partners:
ift88
Intraflagellar transport 88 homolog.
      
 0.605
LOC108244439
Growth associated protein 43.
      
 0.567
pxdn
Peroxidasin.
      
 0.491
ENSKMAP00000022968
Vomeronasal type-1 receptor.
      
 0.491
LOC108245287
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
      
 0.442
LOC108235597
Olfactory receptor class A related 4.
      
 0.432
tmtc1
Transmembrane O-mannosyltransferase targeting cadherins 1.
      
 0.408
LOC108233134
Plexin b1a.
      
 0.405
LOC108248271
Transient receptor potential cation channel subfamily C member 2b.
   
  
 0.403
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.