STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtfr1lMitochondrial fission regulator 1-like. (315 aa)    
Predicted Functional Partners:
cstf1
Cleavage stimulation factor, 3' pre-RNA, subunit 1.
      
 0.635
vps33a
VPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.569
tatdn2
TatD DNase domain containing 2.
      
 0.569
slc12a8
Solute carrier family 12 member 8.
      
 0.565
armc1
Armadillo repeat-containing protein 1.
    
 
 0.525
LOC108242485
Armadillo repeat-containing protein 1.
    
 
 0.523
lamtor3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
      
 0.456
rftn2
Raftlin family member 2.
  
     0.430
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
      
 0.406
pir
Pirin; Belongs to the pirin family.
      
 0.406
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.