Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSKMAP00000012494 | LOC108230320 | ENSKMAP00000012494 | ENSKMAP00000011877 | Helicase ATP-binding domain-containing protein. | Si:ch211-140b10.6. | 0.589 |
ENSKMAP00000012494 | fancm | ENSKMAP00000012494 | ENSKMAP00000012450 | Helicase ATP-binding domain-containing protein. | Helicase C-terminal domain-containing protein. | 0.996 |
ENSKMAP00000012494 | mus81 | ENSKMAP00000012494 | ENSKMAP00000003400 | Helicase ATP-binding domain-containing protein. | MUS81 structure-specific endonuclease subunit. | 0.999 |
ENSKMAP00000012494 | pold1 | ENSKMAP00000012494 | ENSKMAP00000013397 | Helicase ATP-binding domain-containing protein. | DNA polymerase. | 0.848 |
LOC108230320 | ENSKMAP00000012494 | ENSKMAP00000011877 | ENSKMAP00000012494 | Si:ch211-140b10.6. | Helicase ATP-binding domain-containing protein. | 0.589 |
LOC108230320 | LOC108236452 | ENSKMAP00000011877 | ENSKMAP00000009654 | Si:ch211-140b10.6. | Survival of motor neuron 1, telomeric. | 0.586 |
LOC108230320 | Snrpf | ENSKMAP00000011877 | ENSKMAP00000018251 | Si:ch211-140b10.6. | Small nuclear ribonucleoprotein polypeptide F. | 0.481 |
LOC108230320 | ddx20 | ENSKMAP00000011877 | ENSKMAP00000025679 | Si:ch211-140b10.6. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. | 0.488 |
LOC108230320 | fancm | ENSKMAP00000011877 | ENSKMAP00000012450 | Si:ch211-140b10.6. | Helicase C-terminal domain-containing protein. | 0.589 |
LOC108230320 | mus81 | ENSKMAP00000011877 | ENSKMAP00000003400 | Si:ch211-140b10.6. | MUS81 structure-specific endonuclease subunit. | 0.529 |
LOC108230320 | pold1 | ENSKMAP00000011877 | ENSKMAP00000013397 | Si:ch211-140b10.6. | DNA polymerase. | 0.557 |
LOC108230320 | pold2 | ENSKMAP00000011877 | ENSKMAP00000003731 | Si:ch211-140b10.6. | Polymerase (DNA directed), delta 2, regulatory subunit. | 0.579 |
LOC108230320 | snrpd2 | ENSKMAP00000011877 | ENSKMAP00000001972 | Si:ch211-140b10.6. | Small nuclear ribonucleoprotein Sm D2. | 0.496 |
LOC108230320 | snrpe | ENSKMAP00000011877 | ENSKMAP00000007277 | Si:ch211-140b10.6. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.513 |
LOC108236452 | LOC108230320 | ENSKMAP00000009654 | ENSKMAP00000011877 | Survival of motor neuron 1, telomeric. | Si:ch211-140b10.6. | 0.586 |
LOC108236452 | Snrpf | ENSKMAP00000009654 | ENSKMAP00000018251 | Survival of motor neuron 1, telomeric. | Small nuclear ribonucleoprotein polypeptide F. | 0.934 |
LOC108236452 | ddx20 | ENSKMAP00000009654 | ENSKMAP00000025679 | Survival of motor neuron 1, telomeric. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. | 0.998 |
LOC108236452 | snrpd2 | ENSKMAP00000009654 | ENSKMAP00000001972 | Survival of motor neuron 1, telomeric. | Small nuclear ribonucleoprotein Sm D2. | 0.975 |
LOC108236452 | snrpe | ENSKMAP00000009654 | ENSKMAP00000007277 | Survival of motor neuron 1, telomeric. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.962 |
Snrpf | LOC108230320 | ENSKMAP00000018251 | ENSKMAP00000011877 | Small nuclear ribonucleoprotein polypeptide F. | Si:ch211-140b10.6. | 0.481 |
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