STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108249285Plexin_cytopl domain-containing protein. (345 aa)    
Predicted Functional Partners:
ENSKMAP00000016028
Sema domain-containing protein.
 
  
 0.894
ENSKMAP00000019206
Uncharacterized protein.
 
      0.852
ENSKMAP00000008387
Uncharacterized protein.
 
      0.798
LOC108243308
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.704
sema7a
Semaphorin 7A; Belongs to the semaphorin family.
    
 0.704
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.693
sema3e
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family.
    
 0.645
LOC108232056
Uncharacterized protein.
    
 0.609
LOC108231658
RAP1A, member of RAS oncogene family b.
    
 0.609
LOC108243248
Si:ch211-113g11.6; Belongs to the semaphorin family.
    
 0.573
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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