STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108235402Si:dkeyp-77h1.4. (629 aa)    
Predicted Functional Partners:
espl1
Extra spindle pole bodies like 1, separase.
   
 
 0.691
LOC108249804
Uncharacterized protein.
   
  
 0.634
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.597
ndc80
NDC80 kinetochore complex component.
   
  
 0.581
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 
 0.578
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 
 0.578
nusap1
Nucleolar and spindle associated protein 1.
   
  
 0.570
ttk
Ttk protein kinase.
   
  
 0.563
cep55
Centrosomal protein 55 like.
   
  
 0.538
intu
Inturned planar cell polarity protein.
   
 
 0.515
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.