STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108228577Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family. (822 aa)    
Predicted Functional Partners:
LOC108228590
Matrix metallopeptidase 11.
    
 0.809
LOC108242748
Matrix metallopeptidase 11a.
    
 0.734
gramd4
GRAM domain containing 4a.
    
 0.690
LOC108249877
GRAM domain-containing protein.
    
 0.690
edar
Ectodysplasin A receptor.
      
 0.679
lig4
DNA ligase.
   
  
 0.674
proc
Uncharacterized protein.
  
 
 0.674
emc3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
      
 0.664
LOC108228916
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.659
LOC108231281
CD40 ligand; Belongs to the tumor necrosis factor family.
      
 0.648
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.