STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf157Ring finger protein 157. (698 aa)    
Predicted Functional Partners:
cracd
Si:dkeyp-117h8.2.
    
 
 0.575
borcs8
BLOC-1 related complex subunit 8.
      
 0.558
LOC108237151
Uncharacterized protein.
      
 0.523
MOSMO
Modulator of smoothened.
      
 0.523
megf8
Multiple EGF-like-domains 8.
   
 
 0.475
atrnl1
Attractin-like 1b.
   
 
 0.475
atrn
Attractin.
   
 
 0.475
LOC108241173
Ubiquitin-like modifier activating enzyme 3.
     
 0.411
uba3
E2_bind domain-containing protein.
     
 0.411
GPRC5C
G protein-coupled receptor class C group 5 member C.
    
 
 0.409
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.