STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108249290Cyclin-dependent kinase 17. (527 aa)    
Predicted Functional Partners:
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 0.822
LOC108246065
Cell division cycle 25B.
   
 0.783
orc2
Origin recognition complex, subunit 2.
 
 
 0.780
ccna1
Cyclin A1; Belongs to the cyclin family.
   
 0.764
ccna2
Cyclin A2; Belongs to the cyclin family.
   
 0.764
cdc27
Cell division cycle 27.
    
 0.748
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
    
 0.747
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
 0.739
ENSKMAP00000001053
Uncharacterized protein.
    
 0.736
anapc1
Anaphase promoting complex subunit 1.
    
 0.732
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.