STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108238994Dopamine receptor D1b; Belongs to the G-protein coupled receptor 1 family. (463 aa)    
Predicted Functional Partners:
GNAS
GNAS complex locus.
   
 0.956
LOC108231696
GNAS complex locus.
   
 0.956
ENSKMAP00000011778
Dopamine receptor D1; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.901
LOC108251585
Uncharacterized protein.
   
 0.846
yipf6
Protein YIPF.
     
 0.633
LOC108233571
Oxytocin; Belongs to the vasopressin/oxytocin family.
    
 0.627
gnal
Uncharacterized protein.
   
 0.579
LOC108237048
Glutamate receptor, ionotropic, kainate 1a.
   
  
 0.574
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
 0.520
LOC108231344
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
 0.520
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.