STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc45a1Solute carrier family 45 member 1. (807 aa)    
Predicted Functional Partners:
LOC108237357
Chitin synthase 1.
      
 0.540
TYR
Tyrosinase.
   
  
 0.522
slc24a5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.520
dct
Dopachrome tautomerase.
   
  
 0.520
psmb2
Proteasome subunit beta.
   
  
 0.499
oca2
Oculocutaneous albinism II.
      
 0.489
LOC108235795
Premelanosome protein a.
   
  
 0.470
LOC108241576
Tyrosinase-related protein 1b.
   
  
 0.464
tyrp1
Tyrosinase related protein 1.
   
  
 0.464
Foxd1
Forkhead box D1.
    
 
 0.456
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.